Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia isoporae |
| Strain | DSM 26433 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
920505 bp
Thymine Count
914254 bp
Guanine Count
1190771 bp
Cytosine Count
1207235 bp
Genome Length
4232765 bp
Protein-coding Genes
4082 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative integral membrane protein duf2282 | BXY66_1022 | Not Available | Negative | 1007114 - 1007416 | 9836.51 |
| threonyl-trna synthetase | BXY66_1024 | Not Available | Negative | 1008479 - 1010434 | 74116.0 |
| mapeg family protein | BXY66_1025 | Not Available | Negative | 1010572 - 1010979 | 15135.9 |
| arsr family transcriptional regulator | BXY66_1026 | Not Available | Negative | 1010985 - 1011746 | 28304.0 |
| alpha/beta hydrolase family protein | BXY66_1027 | Not Available | Positive | 1011881 - 1012633 | 27458.9 |
| esterase/lipase | BXY66_1028 | Not Available | Positive | 1012633 - 1013613 | 35039.6 |
| hypothetical protein | BXY66_1029 | Not Available | Positive | 1013624 - 1014067 | 15964.8 |
| pimeloyl-acp methyl ester carboxylesterase | BXY66_1030 | Not Available | Positive | 1014131 - 1014841 | 25942.0 |
| hypothetical protein | BXY66_1031 | Not Available | Positive | 1014838 - 1015068 | 8841.35 |
| luciferase family oxidoreductase group 1 | BXY66_1032 | Not Available | Negative | 1015065 - 1016051 | 35758.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
