Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW78_00395 | Not Available | Negative | 95279 - 96163 | 33327.6 |
| faa hydrolase family protein | DWW78_00400 | Not Available | Negative | 96296 - 96919 | 23277.0 |
| lipid-a-disaccharide synthase | DWW78_00405 | Not Available | Negative | 96949 - 98208 | 46940.5 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DWW78_00410 | Not Available | Negative | 98438 - 99124 | 25755.8 |
| mbl fold metallo-hydrolase | DWW78_00415 | Not Available | Negative | 99129 - 99794 | 24607.3 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DWW78_00420 | Not Available | Positive | 99911 - 101320 | 53221.0 |
| hypothetical protein | DWW78_00425 | Not Available | Positive | 101380 - 102327 | 34940.6 |
| duf541 domain-containing protein | DWW78_00430 | Not Available | Positive | 102409 - 103080 | 24646.7 |
| transcriptional regulator | DWW78_00435 | Not Available | Positive | 103224 - 103976 | 27574.7 |
| cytidine deaminase | DWW78_00440 | Not Available | Positive | 104155 - 104613 | 16428.4 |
