Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yitt family protein | DWW78_04230 | Not Available | Negative | 982076 - 982993 | 33476.9 |
| glycerol-3-phosphate 1-o-acyltransferase | DWW78_04235 | Not Available | Positive | 983136 - 983765 | 22189.0 |
| hypothetical protein | DWW78_04240 | Not Available | Negative | 983772 - 986129 | 87714.2 |
| duf3089 domain-containing protein | DWW78_04245 | Not Available | Negative | 986273 - 987241 | 36638.8 |
| sagb/thcox family dehydrogenase | DWW78_04250 | Not Available | Positive | 987519 - 988091 | 20680.7 |
| recq family atp-dependent dna helicase | DWW78_04255 | Not Available | Positive | 988114 - 990045 | 73395.6 |
| 3'-5' exonuclease domain-containing protein 2 | DWW78_04260 | Not Available | Positive | 990058 - 990633 | 21127.7 |
| class i sam-dependent rrna methyltransferase | DWW78_04265 | Not Available | Positive | 990762 - 991904 | 42610.8 |
| nad-dependent epimerase/dehydratase family protein | DWW78_04270 | Not Available | Negative | 992187 - 993143 | 34794.0 |
| beta-glucuronidase | DWW78_04275 | Not Available | Negative | 993323 - 995197 | 71679.0 |
