Alistipes indistinctus

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes indistinctus is a Gram-negative, rod-shaped bacterium that thrives in mesophilic temperatures, categorized as a Chemoheterotroph, and can be found in various body sites, including the gut, skin, and respiratory tract, across different species. As an Obligate Anaerobe, Alistipes indistinctus requires the absence of oxygen to grow and survive. The Gram-negative characteristic indicates that the bacterium has a thin peptidoglycan layer in its cell wall, making it more resistant to certain antibiotics. Its rod-shaped morphology allows it to maintain a large surface area, facilitating the absorption of nutrients from its environment. As a mesophilic microorganism, Alistipes indistinctus grows best in moderate temperatures, typically between 20-45°C, which is ideal for its survival in the human body.As a Chemoheterotroph, Alistipes indistinctus relies on chemical compounds for energy and organic compounds for carbon, breaking down complex molecules into simpler ones to sustain its growth. The bacterium's presence in various body sites, including the gut, skin, and respiratory tract, suggests its ability to adapt to different environments and host-microbe interactions. The absence of oxygen is crucial for its growth, as it is unable to survive in aerobic conditions. Alistipes indistinctus plays a significant role in the human microbiome, particularly in the gut, where it contributes to the breakdown of complex carbohydrates and produces short-chain fatty acids, which can influence host health and disease. Research has shown that an imbalance of Alistipes indistinctus in the gut microbiome has been linked to various diseases, including inflammatory bowel disease and obesity, highlighting the importance of this microbe in maintaining a healthy balance in the human body.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes indistinctus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfecal sample
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes indistinctus strain AF17-14 AF17-14.Scaf27, whole genome

Gene Summary

Adenine Count

689370 bp

Thymine Count

650676 bp

Guanine Count

777761 bp

Cytosine Count

815973 bp

Genome Length

2934025 bp

Protein-coding Genes

2369 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yitt family proteinDWW78_04230Not AvailableNegative982076 - 98299333476.9
glycerol-3-phosphate 1-o-acyltransferaseDWW78_04235Not AvailablePositive983136 - 98376522189.0
hypothetical proteinDWW78_04240Not AvailableNegative983772 - 98612987714.2
duf3089 domain-containing proteinDWW78_04245Not AvailableNegative986273 - 98724136638.8
sagb/thcox family dehydrogenaseDWW78_04250Not AvailablePositive987519 - 98809120680.7
recq family atp-dependent dna helicaseDWW78_04255Not AvailablePositive988114 - 99004573395.6
3'-5' exonuclease domain-containing protein 2DWW78_04260Not AvailablePositive990058 - 99063321127.7
class i sam-dependent rrna methyltransferaseDWW78_04265Not AvailablePositive990762 - 99190442610.8
nad-dependent epimerase/dehydratase family proteinDWW78_04270Not AvailableNegative992187 - 99314334794.0
beta-glucuronidaseDWW78_04275Not AvailableNegative993323 - 99519771679.0

Displaying genes 841 – 850 of 2416 in total

Metabolites

298 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 298 metabolites

Health Effects

Health ConditionRelationReference
Colorectal cancerCausesPMC11110878

Displaying health effects 1 – 1 of 1 in total