Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DWW78_00245 | Not Available | Positive | 55853 - 56596 | 27124.5 |
| tigr00341 family protein | DWW78_00250 | Not Available | Positive | 56636 - 58048 | 51854.2 |
| inositol monophosphatase | DWW78_00255 | Not Available | Positive | 58038 - 58817 | 28948.3 |
| hypothetical protein | DWW78_00260 | Not Available | Positive | 58817 - 59794 | 38862.1 |
| glycosyltransferase family 2 protein | DWW78_00265 | Not Available | Positive | 59883 - 60890 | 38126.0 |
| dipeptidase | DWW78_00270 | Not Available | Negative | 61187 - 62575 | 50492.1 |
| phosphoglucosamine mutase | DWW78_00275 | Not Available | Negative | 62953 - 64341 | 49242.5 |
| phosphorylase | DWW78_00280 | Not Available | Positive | 64409 - 65284 | 32410.1 |
| dna polymerase iii subunit beta | DWW78_00285 | Not Available | Positive | 65373 - 66500 | 41209.8 |
| 3'-5' exonuclease | DWW78_00290 | Not Available | Positive | 66504 - 67280 | 29551.1 |
