Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3473 domain-containing protein | DWW78_02565 | Not Available | Negative | 575618 - 576400 | 29615.6 |
| duf2029 domain-containing protein | DWW78_02570 | Not Available | Negative | 576397 - 578298 | 72504.9 |
| nucleoid-associated protein | DWW78_02575 | Not Available | Positive | 578498 - 579529 | 39995.4 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DWW78_02580 | Not Available | Positive | 579826 - 581280 | 53298.4 |
| glucose-6-phosphate dehydrogenase | DWW78_02585 | Not Available | Positive | 581291 - 582814 | 57797.2 |
| 6-phosphogluconolactonase | DWW78_02590 | Not Available | Positive | 582831 - 583568 | 27424.9 |
| n-acetyltransferase | DWW78_02595 | Not Available | Positive | 583658 - 584170 | 19538.3 |
| duf3795 domain-containing protein | DWW78_02600 | Not Available | Positive | 584301 - 584648 | 13058.9 |
| duf2461 domain-containing protein | DWW78_02605 | Not Available | Positive | 584729 - 585400 | 25553.2 |
| dna mismatch repair protein muts | DWW78_02610 | Not Available | Positive | 585404 - 587188 | 67576.0 |
