Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW78_00195 | Not Available | Negative | 42982 - 43911 | 33336.2 |
| duf4954 family protein | DWW78_00200 | Not Available | Positive | 44190 - 46091 | 68678.8 |
| hypothetical protein | DWW78_00205 | Not Available | Positive | 46091 - 46318 | 8066.68 |
| ribosome biogenesis gtpase der | DWW78_00210 | Not Available | Positive | 46320 - 47624 | 48801.8 |
| hypothetical protein | DWW78_00215 | Not Available | Positive | 48207 - 49856 | 57054.0 |
| hypothetical protein | DWW78_00220 | Not Available | Negative | 50225 - 51034 | 30286.2 |
| glycoside hydrolase family 2 | DWW78_00225 | Not Available | Positive | 51146 - 52807 | 62145.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DWW78_00230 | Not Available | Positive | 52807 - 53280 | 17916.7 |
| nyn domain-containing protein | DWW78_00235 | Not Available | Negative | 53557 - 54471 | 34781.5 |
| hypothetical protein | DWW78_00240 | Not Available | Positive | 55221 - 55853 | 23400.6 |
