Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein | DWW78_00145 | Not Available | Negative | 33028 - 33468 | 16378.3 |
| atp-dependent helicase | DWW78_00150 | Not Available | Negative | 33494 - 34696 | 44410.9 |
| nitronate monooxygenase | DWW78_00155 | Not Available | Negative | 34749 - 35819 | 38455.7 |
| nad-dependent epimerase/dehydratase family protein | DWW78_00160 | Not Available | Negative | 36147 - 36797 | 23083.8 |
| holliday junction resolvase ruvx | DWW78_00165 | Not Available | Positive | 36974 - 37390 | 15612.2 |
| peptide deformylase | DWW78_00170 | Not Available | Positive | 37509 - 38066 | 21224.5 |
| had family hydrolase | DWW78_00175 | Not Available | Positive | 38077 - 38760 | 26087.9 |
| hypothetical protein | DWW78_00180 | Not Available | Negative | 39203 - 39847 | 23329.1 |
| rna polymerase sigma-54 factor | DWW78_00185 | Not Available | Negative | 39861 - 41285 | 54786.5 |
| asparagine--trna ligase | DWW78_00190 | Not Available | Negative | 41402 - 42799 | 52844.1 |
