Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW78_01705 | Not Available | Positive | 388965 - 391403 | 90690.6 |
| hypothetical protein | DWW78_01710 | Not Available | Negative | 391627 - 391989 | 13035.2 |
| response regulator | DWW78_01715 | Not Available | Negative | 392331 - 395042 | 103972.0 |
| helix-turn-helix domain-containing protein | DWW78_01720 | Not Available | Negative | 395067 - 395903 | 32423.4 |
| Trna-asp | Not Available | Not Available | Positive | 396258 - 396334 | Not Available |
| methyltransferase domain-containing protein | DWW78_01730 | Not Available | Negative | 396443 - 396988 | 20515.5 |
| duf3822 family protein | DWW78_01735 | Not Available | Negative | 396975 - 397769 | 29897.1 |
| duf2075 domain-containing protein | DWW78_01740 | Not Available | Positive | 397843 - 399264 | 53537.8 |
| dna mismatch repair protein muts | DWW78_01745 | Not Available | Positive | 399300 - 401954 | 98701.7 |
| uridine kinase | DWW78_01750 | Not Available | Negative | 402017 - 402640 | 23869.9 |
