Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DWW78_01155 | Not Available | Negative | 253091 - 253819 | 27058.2 |
| quinone-dependent dihydroorotate dehydrogenase | DWW78_01160 | Not Available | Negative | 253831 - 254877 | 39283.9 |
| thioredoxin-dependent thiol peroxidase | DWW78_01165 | Not Available | Positive | 255174 - 255635 | 16917.3 |
| recombinase reca | DWW78_01170 | Not Available | Positive | 255658 - 256665 | 35950.5 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DWW78_01175 | Not Available | Positive | 256693 - 258972 | 86366.9 |
| hypothetical protein | DWW78_01180 | Not Available | Positive | 258979 - 259527 | 20066.6 |
| o-methyltransferase | DWW78_01185 | Not Available | Negative | 259604 - 260239 | 23985.0 |
| insulinase family protein | DWW78_01190 | Not Available | Negative | 260247 - 261464 | 46087.2 |
| excinuclease abc subunit a | DWW78_01195 | Not Available | Negative | 261471 - 264527 | 113461.0 |
| aspartate carbamoyltransferase regulatory subunit | DWW78_01200 | Not Available | Negative | 264533 - 264994 | 17333.3 |
