Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes indistinctus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | fecal sample |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689370 bp
Thymine Count
650676 bp
Guanine Count
777761 bp
Cytosine Count
815973 bp
Genome Length
2934025 bp
Protein-coding Genes
2369 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DWW78_00445 | Not Available | Positive | 104662 - 105369 | 26180.5 |
| deoxyhypusine synthase | DWW78_00450 | Not Available | Positive | 105457 - 106431 | 36564.7 |
| duf2007 domain-containing protein | DWW78_00455 | Not Available | Negative | 106660 - 106926 | 9871.95 |
| dna polymerase iii subunit alpha | DWW78_00465 | Not Available | Positive | 108431 - 112054 | 136308.0 |
| thioredoxin | DWW78_00470 | Not Available | Positive | 112271 - 112585 | 11255.7 |
| hypothetical protein | DWW78_00475 | Not Available | Negative | 112779 - 113621 | 31662.0 |
| lytic transglycosylase domain-containing protein | DWW78_00480 | Not Available | Positive | 113883 - 114785 | 33392.9 |
| excinuclease abc subunit uvra | DWW78_00485 | Not Available | Positive | 114793 - 117648 | 105601.0 |
| sdr family oxidoreductase | DWW78_00490 | Not Available | Negative | 118144 - 118956 | 29187.5 |
| radical sam protein | DWW78_00495 | Not Available | Negative | 119090 - 121216 | 80453.8 |
