Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 2 family protein | BACPLE_00054 | Not Available | Positive | 53210 - 54265 | 42259.6 |
| glycosyltransferase, group 1 family protein | BACPLE_00055 | Not Available | Positive | 54272 - 55477 | 46093.0 |
| hypothetical protein | BACPLE_00056 | Not Available | Positive | 55489 - 56181 | 27161.6 |
| hypothetical protein | BACPLE_00057 | Not Available | Positive | 56193 - 57266 | 41103.7 |
| glycosyltransferase, group 2 family protein | BACPLE_00058 | Not Available | Positive | 57283 - 58182 | 34622.7 |
| glycosyltransferase, group 1 family protein | BACPLE_00059 | Not Available | Positive | 58179 - 59306 | 43695.9 |
| glycosyltransferase, group 2 family protein | BACPLE_00060 | Not Available | Positive | 59310 - 60335 | 39860.3 |
| glycosyltransferase, group 2 family protein | BACPLE_00061 | Not Available | Positive | 60340 - 61335 | 38931.7 |
| glycosyltransferase, group 1 family protein | BACPLE_00062 | Not Available | Positive | 61332 - 62477 | 44237.7 |
| glycosyltransferase, group 1 family protein | BACPLE_00063 | Not Available | Positive | 62449 - 63618 | 44460.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

