Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AF39-11
Accession NumberQROI00000000.1
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transcriptional regulator | DW035_01140 | Not Available | + | 291451 - 292002 | 21757.0 |
| hypothetical protein | DW035_01145 | Not Available | + | 292021 - 292257 | 9031.23 |
| hypothetical protein | DW035_01150 | Not Available | + | 292257 - 292544 | 11034.5 |
| 3_nc_021789: atpase containing protein | DW035_01155 | Not Available | + | 292541 - 294535 | 75022.6 |
| Gp42 | DW035_01160 | Not Available | + | 294547 - 295536 | 36475.6 |
| Metallohydrolase | DW035_01165 | Not Available | + | 295536 - 296270 | 26817.6 |
| Hypothetical protein | DW035_01170 | Not Available | + | 296273 - 296638 | 13608.7 |
| hypothetical protein | DW035_01175 | Not Available | + | 296628 - 297065 | 16823.1 |
| hypothetical protein | DW035_01180 | Not Available | + | 297200 - 297781 | 21850.1 |
| hypothetical protein | DW035_01185 | Not Available | + | 297778 - 298152 | 14530.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
