Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AM17-44
Accession NumberQRJS00000000.1
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tape measure domain protein | DW204_07730 | Not Available | - | 1935644 - 1940035 | 162886.0 |
| Hypothetical protein | DW204_07735 | Not Available | - | 1940036 - 1940236 | 7346.62 |
| hypothetical protein | DW204_07740 | Not Available | - | 1940275 - 1940766 | 18742.3 |
| hypothetical protein | DW204_07745 | Not Available | - | 1940770 - 1941345 | 20567.4 |
| hypothetical protein | DW204_07750 | Not Available | - | 1941342 - 1941689 | 12500.0 |
| hypothetical protein | DW204_07755 | Not Available | - | 1941631 - 1942110 | 17515.8 |
| Hypothetical protein | DW204_07760 | Not Available | - | 1942138 - 1942524 | 13660.9 |
| N-acetylmuramoyl-l-alanine amidase | DW204_07765 | Not Available | - | 1942537 - 1943001 | 17191.3 |
| hypothetical protein | DW204_07770 | Not Available | - | 1943001 - 1944224 | 44775.1 |
| Capsid maturation protease | DW204_07775 | Not Available | - | 1944235 - 1945272 | 38785.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
