Phocaeicola plebeius strain TF10-3AC

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius strain TF10-3AC is a Gram-negative, nonsporulating rod that functions as a chemoheterotroph and is adapted to anaerobic environments. This strain is part of the animal intestinal microflora, suggesting its role in the gut ecosystem where it may contribute to the complex interactions among microbial communities. As an anaerobe, P. plebeius strain TF10-3AC thrives in environments devoid of oxygen, which is typical for many gut bacteria that have evolved to metabolize compounds derived from host digestion and fermentation processes. The absence of sporulation indicates that this strain does not produce spores as a means of survival, which may imply a reliance on stable, nutrient-rich environments such as the intestinal tract of animals. The presence of P. plebeius strain TF10-3AC within animal intestinal microflora indicates its potential involvement in the digestion of dietary components and possibly in the modulation of the host’s immune responses. Understanding the specific contributions of this strain to gut health and function could provide insights into the role of anaerobic bacteria in overall host well-being and the maintenance of intestinal homeostasis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius strain TF10-3AC
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius strain TF10-3AC

Accession NumberQSQT00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+455 - 1988Not Available
phosphopyruvate hydrataseDXD04_00005Not Available-544 - 182446124.0
23s ribosomal rnaNot AvailableNot Available+2482 - 5370Not Available
rubrerythrin family proteinDXD04_00010Not Available-1989 - 256721713.7
stas domain-containing proteinDXD04_00015Not Available+2915 - 460961196.5
5s ribosomal rnaNot AvailableNot Available+5473 - 5581Not Available
helix-hairpin-helix domain-containing proteinDXD04_00020Not Available-4833 - 680077144.6
duf4294 domain-containing proteinDXD04_00025Not Available+7010 - 756121321.2
trmh family rna methyltransferaseDXD04_00030Not Available-7615 - 816020441.9
quinolinate synthase nadaDXD04_00035Not Available+8612 - 960436702.4

Displaying genes 1 – 10 of 3248 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites