Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain TF10-3AC
Accession NumberQSQT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 455 - 1988 | Not Available |
| phosphopyruvate hydratase | DXD04_00005 | Not Available | - | 544 - 1824 | 46124.0 |
| 23s ribosomal rna | Not Available | Not Available | + | 2482 - 5370 | Not Available |
| rubrerythrin family protein | DXD04_00010 | Not Available | - | 1989 - 2567 | 21713.7 |
| stas domain-containing protein | DXD04_00015 | Not Available | + | 2915 - 4609 | 61196.5 |
| 5s ribosomal rna | Not Available | Not Available | + | 5473 - 5581 | Not Available |
| helix-hairpin-helix domain-containing protein | DXD04_00020 | Not Available | - | 4833 - 6800 | 77144.6 |
| duf4294 domain-containing protein | DXD04_00025 | Not Available | + | 7010 - 7561 | 21321.2 |
| trmh family rna methyltransferase | DXD04_00030 | Not Available | - | 7615 - 8160 | 20441.9 |
| quinolinate synthase nada | DXD04_00035 | Not Available | + | 8612 - 9604 | 36702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
