Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | BACPLE_00034 | Not Available | Negative | 30918 - 31283 | 13472.2 |
| hypothetical protein | BACPLE_00035 | Not Available | Negative | 31304 - 31549 | 8950.15 |
| lysr substrate binding domain protein | BACPLE_00036 | Not Available | Positive | 31652 - 32596 | 35620.4 |
| hypothetical protein | BACPLE_00037 | Not Available | Negative | 32671 - 33978 | 48019.0 |
| hypothetical protein | BACPLE_00038 | Not Available | Negative | 33999 - 35474 | 54090.2 |
| hypothetical protein | BACPLE_00039 | Not Available | Negative | 35502 - 36548 | 38328.7 |
| hypothetical protein | BACPLE_00040 | Not Available | Negative | 36592 - 37773 | 44190.6 |
| tonb-dependent receptor | BACPLE_00041 | Not Available | Negative | 37749 - 39758 | 76375.9 |
| hypothetical protein | BACPLE_00042 | Not Available | Negative | 40517 - 40732 | 8672.91 |
| hypothetical protein | BACPLE_00043 | Not Available | Positive | 40849 - 41034 | 6718.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

