Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-eliminating lyase | BACPLE_00024 | Not Available | Negative | 18348 - 19382 | 38253.9 |
| response regulator receiver domain protein | BACPLE_00025 | Not Available | Negative | 19402 - 20112 | 26725.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00026 | Not Available | Negative | 20114 - 21511 | 53201.5 |
| tonb-dependent receptor | BACPLE_00027 | Not Available | Positive | 21614 - 23923 | 87551.4 |
| hypothetical protein | BACPLE_00028 | Not Available | Positive | 24193 - 24786 | 21307.7 |
| oxidoreductase, nad-binding domain protein | BACPLE_00029 | Not Available | Negative | 24877 - 25860 | 36308.9 |
| primosomal protein n' | BACPLE_00030 | Not Available | Positive | 25952 - 28414 | 94156.4 |
| php domain protein | BACPLE_00031 | Not Available | Positive | 28426 - 29142 | 26570.1 |
| low molecular weight phosphotyrosine protein phosphatase | BACPLE_00032 | Not Available | Positive | 29139 - 29621 | 18569.0 |
| anaerobic sulfatase maturase | BACPLE_00033 | Not Available | Positive | 29650 - 30876 | 47318.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

