Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00976 | Not Available | Positive | 1096551 - 1097426 | 34093.9 |
| hypothetical protein | BACPLE_00977 | Not Available | Positive | 1097419 - 1098228 | 31748.6 |
| hypothetical protein | BACPLE_00978 | Not Available | Negative | 1098470 - 1098613 | 5872.2 |
| caspase domain protein | BACPLE_00979 | Not Available | Positive | 1098681 - 1101668 | 114632.0 |
| sel1 repeat protein | BACPLE_00980 | Not Available | Positive | 1101676 - 1103415 | 66838.6 |
| hypothetical protein | BACPLE_00981 | Not Available | Positive | 1103412 - 1104617 | 46665.5 |
| hypothetical protein | BACPLE_00982 | Not Available | Positive | 1104656 - 1105246 | 22893.6 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00983 | Not Available | Negative | 1106428 - 1110720 | 162603.0 |
| glycosyl hydrolase family 49 | BACPLE_00984 | Not Available | Negative | 1110974 - 1112410 | 54213.8 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_00985 | Not Available | Positive | 1112708 - 1114474 | 68591.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

