Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00946 | Not Available | Negative | 1069301 - 1070902 | 59109.6 |
| hypothetical protein | BACPLE_00948 | Not Available | Negative | 1071220 - 1071504 | 10662.0 |
| hypothetical protein | BACPLE_00947 | Not Available | Positive | 1071481 - 1071654 | 7105.9 |
| rna polymerase sigma-70 factor | BACPLE_00949 | Not Available | Positive | 1071715 - 1072230 | 20152.7 |
| sigma factor regulatory protein, fecr/pupr family | BACPLE_00950 | Not Available | Positive | 1072302 - 1073105 | 30531.9 |
| tonb-dependent receptor plug domain protein | BACPLE_00951 | Not Available | Positive | 1073102 - 1075663 | 97188.7 |
| hypothetical protein | BACPLE_00952 | Not Available | Positive | 1075668 - 1076099 | 15648.7 |
| hypothetical protein | BACPLE_00953 | Not Available | Positive | 1076080 - 1076649 | 21985.6 |
| hypothetical protein | BACPLE_00954 | Not Available | Positive | 1076665 - 1077291 | 22995.6 |
| hypothetical protein | BACPLE_00955 | Not Available | Positive | 1077318 - 1078160 | 31669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

