Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00936 | Not Available | Negative | 1062105 - 1062224 | 4707.86 |
| tetratricopeptide repeat protein | BACPLE_00937 | Not Available | Positive | 1062265 - 1063683 | 53934.7 |
| hypothetical protein | BACPLE_00938 | Not Available | Positive | 1063697 - 1064161 | 16657.6 |
| spfh/band 7/phb domain protein | BACPLE_00939 | Not Available | Positive | 1064203 - 1065204 | 35890.6 |
| phosphorylase family | BACPLE_00940 | Not Available | Positive | 1065252 - 1066130 | 32253.7 |
| gaf domain protein | BACPLE_00941 | Not Available | Positive | 1066203 - 1066694 | 18135.6 |
| hypothetical protein | BACPLE_00942 | Not Available | Negative | 1066905 - 1067399 | 17381.3 |
| hypothetical protein | BACPLE_00943 | Not Available | Positive | 1067400 - 1068197 | 28958.7 |
| hypothetical protein | BACPLE_00944 | Not Available | Positive | 1068418 - 1068546 | 4472.32 |
| dna binding domain, excisionase family | BACPLE_00945 | Not Available | Positive | 1068524 - 1069459 | 36982.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

