Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide transporter pnuc | BACPLE_00927 | Not Available | Negative | 1052238 - 1053059 | 32131.7 |
| hypothetical protein | BACPLE_00926 | Not Available | Positive | 1053018 - 1053152 | 5127.13 |
| toxin-antitoxin system, toxin component, fic family | BACPLE_00928 | Not Available | Positive | 1053145 - 1054149 | 38752.0 |
| carboxymuconolactone decarboxylase family protein | BACPLE_00929 | Not Available | Positive | 1054313 - 1055134 | 30409.0 |
| hypothetical protein | BACPLE_00930 | Not Available | Positive | 1055219 - 1055767 | 19911.2 |
| tonb-dependent receptor | BACPLE_00931 | Not Available | Positive | 1055898 - 1057805 | 70892.9 |
| peptidase, m28 family | BACPLE_00932 | Not Available | Positive | 1057852 - 1058868 | 37775.7 |
| hydroxylamine reductase | BACPLE_00933 | Not Available | Negative | 1058873 - 1060525 | 60439.9 |
| cyclic nucleotide-binding domain protein | BACPLE_00934 | Not Available | Positive | 1060640 - 1061263 | 23480.6 |
| pp-loop family protein | BACPLE_00935 | Not Available | Negative | 1061267 - 1062031 | 29433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

