Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--trna ligase | BACPLE_00916 | Not Available | Negative | 1040578 - 1042341 | 66602.1 |
| thioredoxin-disulfide reductase | BACPLE_00917 | Not Available | Positive | 1042555 - 1043502 | 33727.2 |
| peptidase m16 inactive domain protein | BACPLE_00918 | Not Available | Positive | 1043536 - 1046355 | 106118.0 |
| hypothetical protein | BACPLE_00919 | Not Available | Positive | 1046380 - 1047867 | 56869.0 |
| abc transporter, atp-binding protein | BACPLE_00920 | Not Available | Positive | 1047899 - 1048606 | 26612.8 |
| nlpc/p60 family protein | BACPLE_00921 | Not Available | Positive | 1048790 - 1049230 | 16876.1 |
| hypothetical protein | BACPLE_00922 | Not Available | Positive | 1049283 - 1050209 | 35729.6 |
| hypothetical protein | BACPLE_00923 | Not Available | Negative | 1050223 - 1050597 | 14418.1 |
| mip family channel protein | BACPLE_00924 | Not Available | Negative | 1050676 - 1051359 | 23108.0 |
| thiamine diphosphokinase | BACPLE_00925 | Not Available | Negative | 1051570 - 1052232 | 24513.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

