Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase | BACPLE_00906 | Not Available | Negative | 1032277 - 1032942 | 25236.4 |
| hypothetical protein | BACPLE_00907 | Not Available | Positive | 1033100 - 1033966 | 32179.0 |
| 16s rrna methyltransferase gidb | BACPLE_00908 | Not Available | Positive | 1033973 - 1034599 | 23835.1 |
| metallo-beta-lactamase domain protein | BACPLE_00909 | Not Available | Positive | 1034605 - 1035246 | 23997.7 |
| glycine dehydrogenase | BACPLE_00910 | Not Available | Positive | 1035293 - 1038142 | 104189.0 |
| hypothetical protein | BACPLE_00911 | Not Available | Negative | 1038117 - 1038281 | 6564.85 |
| hypothetical protein | BACPLE_00913 | Not Available | Negative | 1038291 - 1038416 | 4986.27 |
| hypothetical protein | BACPLE_00912 | Not Available | Positive | 1038402 - 1039715 | 49887.4 |
| act domain protein | BACPLE_00914 | Not Available | Positive | 1039728 - 1040156 | 15848.2 |
| gtra-like protein | BACPLE_00915 | Not Available | Negative | 1040153 - 1040542 | 15123.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

