Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase | BACPLE_00896 | Not Available | Positive | 1022689 - 1024155 | 55616.2 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACPLE_00897 | Not Available | Positive | 1024164 - 1024892 | 26157.9 |
| outer membrane lipoprotein carrier protein lola | BACPLE_00898 | Not Available | Positive | 1024889 - 1025482 | 22391.4 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | BACPLE_00899 | Not Available | Positive | 1025484 - 1025918 | 17220.2 |
| hypothetical protein | BACPLE_00900 | Not Available | Positive | 1025942 - 1026970 | 38901.9 |
| hypothetical protein | BACPLE_00901 | Not Available | Positive | 1026976 - 1027959 | 37964.1 |
| hypothetical protein | BACPLE_00902 | Not Available | Positive | 1028014 - 1030575 | 98808.7 |
| hypothetical protein | BACPLE_00903 | Not Available | Positive | 1030621 - 1030800 | 6764.1 |
| bacterial transferase hexapeptide repeat protein | BACPLE_00904 | Not Available | Negative | 1030801 - 1031364 | 20527.8 |
| hypothetical protein | BACPLE_00905 | Not Available | Positive | 1031562 - 1032248 | 26635.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

