Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane insertion signal domain protein | BACPLE_00866 | Not Available | Positive | 989657 - 990253 | 22161.4 |
| hypothetical protein | BACPLE_00867 | Not Available | Negative | 990250 - 990429 | 7390.81 |
| Trna-lys | Not Available | Not Available | Positive | 990450 - 990525 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 990557 - 990632 | Not Available |
| tonb-dependent receptor plug domain protein | BACPLE_00870 | Not Available | Positive | 990825 - 992069 | 44643.5 |
| site-specific recombinase, phage integrase family | BACPLE_00871 | Not Available | Positive | 992265 - 993635 | 52209.6 |
| hypothetical protein | BACPLE_00872 | Not Available | Positive | 993646 - 994836 | 44167.0 |
| dna binding domain, excisionase family | BACPLE_00873 | Not Available | Positive | 995010 - 995321 | 12005.4 |
| hypothetical protein | BACPLE_00874 | Not Available | Positive | 995356 - 996078 | 26564.7 |
| hypothetical protein | BACPLE_00875 | Not Available | Positive | 996255 - 996605 | 13290.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

