Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redoxin family protein | BACPLE_00836 | Not Available | Negative | 957285 - 958040 | 28623.1 |
| transcriptional regulator, blai/meci/copy family | BACPLE_00837 | Not Available | Negative | 958037 - 958399 | 14095.9 |
| hypothetical protein | BACPLE_00838 | Not Available | Positive | 958626 - 958748 | 4781.52 |
| hypothetical protein | BACPLE_00839 | Not Available | Negative | 959191 - 959325 | 5555.91 |
| hypothetical protein | BACPLE_00840 | Not Available | Negative | 959373 - 959744 | 14117.6 |
| dna polymerase iii, beta subunit | BACPLE_00841 | Not Available | Positive | 959828 - 961045 | 45141.8 |
| exonuclease | BACPLE_00842 | Not Available | Positive | 961069 - 961845 | 29408.8 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | BACPLE_00843 | Not Available | Positive | 961858 - 963063 | 43483.5 |
| dna repair protein recn | BACPLE_00844 | Not Available | Positive | 963070 - 964737 | 62002.1 |
| rna methyltransferase, trmh family, group 3 | BACPLE_00845 | Not Available | Positive | 964756 - 965505 | 27417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

