Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00826 | Not Available | Positive | 947987 - 948124 | 5643.05 |
| type i restriction enzyme hsdr protein n-terminal domain protein | BACPLE_00827 | Not Available | Positive | 948112 - 948561 | 17648.4 |
| putative zinc ribbon domain protein | BACPLE_00828 | Not Available | Negative | 948629 - 949420 | 30629.0 |
| dinuclear metal center protein, ybgi family | BACPLE_00829 | Not Available | Negative | 949427 - 950521 | 40697.9 |
| kdpg and khg aldolase | BACPLE_00830 | Not Available | Negative | 950705 - 951373 | 23929.3 |
| kinase, pfkb family | BACPLE_00831 | Not Available | Negative | 951413 - 952435 | 37012.8 |
| hypothetical protein | BACPLE_00832 | Not Available | Positive | 952511 - 952672 | 6444.02 |
| transcriptional regulator, laci family | BACPLE_00833 | Not Available | Positive | 952653 - 953729 | 41260.2 |
| saf domain protein | BACPLE_00834 | Not Available | Positive | 953751 - 955244 | 54375.9 |
| tonb-dependent receptor | BACPLE_00835 | Not Available | Negative | 955328 - 957223 | 70756.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

