Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase (nad+) | BACPLE_00817 | Not Available | Negative | 939463 - 941463 | 75661.7 |
| trna (guanine-n(1)-)-methyltransferase | BACPLE_00816 | Not Available | Positive | 941462 - 942217 | 28776.7 |
| 4fe-4s binding domain protein | BACPLE_00818 | Not Available | Positive | 942245 - 943006 | 27555.3 |
| hypothetical protein | BACPLE_00819 | Not Available | Negative | 943009 - 943188 | 6919.53 |
| dihydroorotate dehydrogenase 1b | BACPLE_00820 | Not Available | Negative | 943172 - 944083 | 32300.3 |
| oxidoreductase nad-binding domain protein | BACPLE_00821 | Not Available | Negative | 944071 - 944847 | 28251.7 |
| dna-binding helix-turn-helix protein | BACPLE_00822 | Not Available | Negative | 944941 - 945390 | 17140.6 |
| hypothetical protein | BACPLE_00823 | Not Available | Negative | 945871 - 946026 | 6027.18 |
| dna polymerase iii, delta subunit | BACPLE_00824 | Not Available | Negative | 946101 - 947117 | 38815.2 |
| putative amp nucleosidase | BACPLE_00825 | Not Available | Negative | 947128 - 947904 | 29211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

