Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal sequence domain protein | BACPLE_00766 | Not Available | Positive | 893007 - 894137 | 42777.3 |
| antibiotic biosynthesis monooxygenase | BACPLE_00767 | Not Available | Positive | 894127 - 895152 | 38152.1 |
| permease, yjgp/yjgq family | BACPLE_00768 | Not Available | Negative | 895232 - 896407 | 45494.9 |
| pp_00750 | BACPLE_00769 | Not Available | Negative | 896429 - 897559 | Not Available |
| endopeptidase la | BACPLE_00770 | Not Available | Negative | 897556 - 900039 | 93095.9 |
| hypothetical protein | BACPLE_00772 | Not Available | Negative | 900148 - 900270 | 4900.07 |
| methyltransferase domain protein | BACPLE_00771 | Not Available | Positive | 900226 - 900942 | 26665.9 |
| lipid kinase, yegs/rv2252/bmru family | BACPLE_00773 | Not Available | Negative | 900953 - 901987 | 38129.2 |
| putative 8-amino-7-oxononanoate synthase | BACPLE_00774 | Not Available | Positive | 902213 - 903400 | 44351.3 |
| hypothetical protein | BACPLE_00775 | Not Available | Positive | 903675 - 904208 | 19368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

