Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00746 | Not Available | Positive | 871087 - 871875 | 30365.5 |
| putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase | BACPLE_00747 | Not Available | Negative | 871857 - 872210 | 13560.2 |
| prolipoprotein diacylglyceryl transferase | BACPLE_00748 | Not Available | Negative | 872242 - 873069 | 31742.5 |
| putative membrane protein | BACPLE_00749 | Not Available | Negative | 873196 - 874074 | 31882.7 |
| hypothetical protein | BACPLE_00751 | Not Available | Negative | 874074 - 874223 | 5680.71 |
| transcriptional regulator, arac family | BACPLE_00750 | Not Available | Positive | 874222 - 875070 | 33071.9 |
| redoxin family protein | BACPLE_00752 | Not Available | Positive | 875461 - 877686 | 84551.9 |
| dead/deah box helicase | BACPLE_00753 | Not Available | Negative | 877831 - 879105 | 47567.6 |
| phosphoserine phosphatase serb | BACPLE_00754 | Not Available | Negative | 879126 - 880445 | 49431.1 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00756 | Not Available | Negative | 880484 - 882535 | 78394.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

