Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c1-like family | BACPLE_00726 | Not Available | Positive | 848776 - 850170 | 52511.9 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00727 | Not Available | Positive | 850309 - 853059 | 101607.0 |
| susd family protein | BACPLE_00728 | Not Available | Positive | 853070 - 854701 | 62214.2 |
| hypothetical protein | BACPLE_00730 | Not Available | Negative | 854754 - 854876 | 4975.32 |
| nadh:ubiquinone oxidoreductase, na(+)-translocating, a subunit | BACPLE_00729 | Not Available | Positive | 854875 - 856227 | 49389.9 |
| nadh:ubiquinone oxidoreductase, b subunit | BACPLE_00731 | Not Available | Positive | 856253 - 857428 | 42504.4 |
| nadh:ubiquinone oxidoreductase, na(+)-translocating, c subunit | BACPLE_00732 | Not Available | Positive | 857443 - 858123 | 24536.1 |
| nadh:ubiquinone oxidoreductase, d subunit | BACPLE_00733 | Not Available | Positive | 858138 - 858776 | 22950.9 |
| nadh:ubiquinone oxidoreductase, e subunit | BACPLE_00734 | Not Available | Positive | 858813 - 859436 | 22312.3 |
| nadh:ubiquinone oxidoreductase, f subunit | BACPLE_00735 | Not Available | Positive | 859455 - 860723 | 46708.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

