Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BACPLE_00706 | Not Available | Negative | 821826 - 822305 | 17543.3 |
| fah family protein | BACPLE_00707 | Not Available | Negative | 822302 - 822919 | 23207.0 |
| coa binding domain protein | BACPLE_00708 | Not Available | Negative | 822924 - 823577 | 24308.6 |
| putative translation initiation factor sui1 | BACPLE_00709 | Not Available | Positive | 823688 - 824026 | 12593.1 |
| arylsulfatase | BACPLE_00710 | Not Available | Negative | 824181 - 825722 | 56026.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00711 | Not Available | Negative | 825753 - 829793 | 153195.0 |
| glycosyl hydrolase, family 88 | BACPLE_00712 | Not Available | Positive | 830137 - 831369 | 47020.4 |
| arylsulfatase | BACPLE_00713 | Not Available | Positive | 831394 - 832941 | 59211.9 |
| response regulator receiver domain protein | BACPLE_00714 | Not Available | Negative | 832991 - 833764 | 29528.3 |
| tetratricopeptide repeat protein | BACPLE_00715 | Not Available | Positive | 833985 - 836009 | 78908.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

