Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00639 | Not Available | Positive | 746999 - 749215 | 82183.6 |
| beta galactosidase small chain | BACPLE_00640 | Not Available | Positive | 749658 - 753005 | 127420.0 |
| carbohydrate binding domain protein | BACPLE_00641 | Not Available | Negative | 753558 - 755537 | 74686.4 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00642 | Not Available | Positive | 755776 - 759972 | 159472.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 758957 - 760260 | Not Available |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00643 | Not Available | Positive | 760513 - 763707 | 118251.0 |
| susd family protein | BACPLE_00644 | Not Available | Positive | 763741 - 765492 | 66415.6 |
| hypothetical protein | BACPLE_00645 | Not Available | Positive | 765553 - 767349 | 64897.0 |
| glycosyl hydrolase, family 43 | BACPLE_00646 | Not Available | Positive | 767418 - 769319 | 70735.9 |
| glycosyl hydrolase, family 43 | BACPLE_00647 | Not Available | Positive | 769419 - 770426 | 37515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

