Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase n-terminal domain protein | BACPLE_00609 | Not Available | Positive | 702124 - 705540 | 128387.0 |
| transcriptional regulator, arac family | BACPLE_00610 | Not Available | Negative | 705626 - 706519 | 34783.3 |
| hypothetical protein | BACPLE_00611 | Not Available | Negative | 706494 - 706655 | 6174.57 |
| putative rhamnulokinase | BACPLE_00612 | Not Available | Positive | 706682 - 708160 | 54486.4 |
| l-rhamnose isomerase | BACPLE_00613 | Not Available | Positive | 708167 - 709420 | 47630.7 |
| l-rhamnose-proton symport protein (rhat) | BACPLE_00614 | Not Available | Positive | 709486 - 710496 | 36502.4 |
| putative rhamnulose-1-phosphate aldolase | BACPLE_00615 | Not Available | Positive | 710523 - 711332 | 30157.6 |
| lactaldehyde reductase | BACPLE_00616 | Not Available | Positive | 711374 - 712519 | 40392.3 |
| putative serine o-acetyltransferase | BACPLE_00617 | Not Available | Negative | 712739 - 713650 | 33111.8 |
| hypothetical protein | BACPLE_00618 | Not Available | Positive | 713733 - 713864 | 4942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

