Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BACPLE_00589 | Not Available | Negative | 678384 - 679937 | 58857.6 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00590 | Not Available | Negative | 679951 - 683316 | 124209.0 |
| bnr/asp-box repeat protein | BACPLE_00591 | Not Available | Negative | 683659 - 685251 | 58835.3 |
| yhch/yjgk/yial family protein | BACPLE_00592 | Not Available | Negative | 685297 - 685743 | 16860.3 |
| transporter, major facilitator family protein | BACPLE_00593 | Not Available | Negative | 685763 - 687001 | 44882.6 |
| n-acylglucosamine 2-epimerase | BACPLE_00594 | Not Available | Negative | 687040 - 688224 | 45905.8 |
| dihydrodipicolinate synthetase family | BACPLE_00595 | Not Available | Negative | 688235 - 689152 | 33866.0 |
| cyclically-permuted mutarotase family protein | BACPLE_00596 | Not Available | Negative | 689244 - 690326 | 39995.2 |
| rok family protein | BACPLE_00597 | Not Available | Positive | 690626 - 691834 | 44424.1 |
| hypothetical protein | BACPLE_00598 | Not Available | Negative | 691897 - 692106 | 7717.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

