Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ser/thr phosphatase family protein | BACPLE_00579 | Not Available | Negative | 665705 - 666688 | 37054.0 |
| snare-like domain protein | BACPLE_00580 | Not Available | Negative | 666777 - 667241 | 17155.4 |
| hypothetical protein | BACPLE_00581 | Not Available | Negative | 667217 - 668152 | 35644.9 |
| phosphoribosylamine--glycine ligase | BACPLE_00582 | Not Available | Negative | 668156 - 669430 | 45551.0 |
| peptidase, s9a/b/c family, catalytic domain protein | BACPLE_00583 | Not Available | Negative | 669454 - 671661 | 83497.2 |
| thump domain protein | BACPLE_00584 | Not Available | Negative | 671711 - 673231 | 58367.9 |
| gdsl-like protein | BACPLE_00585 | Not Available | Negative | 673531 - 675606 | 79050.8 |
| gdsl-like protein | BACPLE_00586 | Not Available | Negative | 675608 - 676270 | 25227.3 |
| glycosyl hydrolase family 20, catalytic domain protein | BACPLE_00588 | Not Available | Negative | 676298 - 678310 | 78344.5 |
| hypothetical protein | BACPLE_00587 | Not Available | Positive | 678282 - 678407 | 5005.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

