Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00569 | Not Available | Positive | 653478 - 653870 | 15150.9 |
| dihydrolipoyl dehydrogenase | BACPLE_00570 | Not Available | Positive | 653895 - 655235 | 48107.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BACPLE_00571 | Not Available | Positive | 655249 - 656664 | 52823.7 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACPLE_00572 | Not Available | Positive | 656881 - 657675 | 28099.0 |
| hypothetical protein | BACPLE_00573 | Not Available | Positive | 657770 - 659005 | 45225.1 |
| polysaccharide deacetylase | BACPLE_00574 | Not Available | Negative | 659073 - 659684 | 24380.6 |
| hypothetical protein | BACPLE_00575 | Not Available | Negative | 659824 - 663156 | 126932.0 |
| abc transporter, atp-binding protein | BACPLE_00576 | Not Available | Negative | 663268 - 664035 | 28583.8 |
| abc transporter, substrate-binding protein | BACPLE_00577 | Not Available | Negative | 664047 - 664916 | 32900.3 |
| hypothetical protein | BACPLE_00578 | Not Available | Negative | 664988 - 665653 | 25172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

