Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00536 | Not Available | Positive | 618643 - 619995 | 51997.6 |
| peptidase, m24 family | BACPLE_00537 | Not Available | Positive | 620009 - 621382 | 51313.7 |
| putative membrane protein | BACPLE_00538 | Not Available | Positive | 621379 - 622287 | 33175.6 |
| hypothetical protein | BACPLE_00539 | Not Available | Positive | 622485 - 625151 | 101536.0 |
| f5/8 type c domain protein | BACPLE_00540 | Not Available | Positive | 625135 - 627582 | 92302.0 |
| hypothetical protein | BACPLE_00541 | Not Available | Positive | 627602 - 630022 | 90806.5 |
| peptidase, s9a/b/c family, catalytic domain protein | BACPLE_00542 | Not Available | Positive | 630131 - 632395 | 86547.3 |
| hypothetical protein | BACPLE_00543 | Not Available | Negative | 632415 - 633680 | 47255.0 |
| atp-dependent metallopeptidase hflb | BACPLE_00544 | Not Available | Positive | 633823 - 635682 | 68169.5 |
| transcriptional regulator, arac family | BACPLE_00545 | Not Available | Negative | 635689 - 636537 | 32782.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

