Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc 3 transport family protein | BACPLE_00526 | Not Available | Negative | 599924 - 600745 | 29723.4 |
| hypothetical protein | BACPLE_00527 | Not Available | Negative | 600760 - 601179 | 16377.6 |
| putative 3-phosphoshikimate 1-carboxyvinyltransferase | BACPLE_00528 | Not Available | Negative | 601191 - 602423 | 45420.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_00529 | Not Available | Negative | 602465 - 606433 | 150765.0 |
| alpha-galactosidase | BACPLE_00530 | Not Available | Positive | 606845 - 608080 | 46853.1 |
| hypothetical protein | BACPLE_00531 | Not Available | Positive | 608256 - 610721 | 92298.9 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00532 | Not Available | Positive | 610835 - 613786 | 109272.0 |
| susd family protein | BACPLE_00533 | Not Available | Positive | 613799 - 615463 | 63381.7 |
| hypothetical protein | BACPLE_00534 | Not Available | Positive | 615518 - 616513 | 36218.8 |
| hypothetical protein | BACPLE_00535 | Not Available | Positive | 616643 - 618646 | 75445.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

