Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00516 | Not Available | Positive | 588896 - 589498 | 21514.9 |
| alanine racemase | BACPLE_00517 | Not Available | Negative | 589590 - 592055 | 92335.9 |
| gscfa family protein | BACPLE_00518 | Not Available | Negative | 592031 - 593017 | 38515.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BACPLE_00519 | Not Available | Positive | 593089 - 595008 | 70632.2 |
| trka n-terminal domain protein | BACPLE_00520 | Not Available | Positive | 595005 - 596342 | 48822.1 |
| hypothetical protein | BACPLE_00521 | Not Available | Positive | 596409 - 597785 | 50979.1 |
| hypothetical protein | BACPLE_00522 | Not Available | Negative | 597850 - 598431 | 22184.6 |
| ribonuclease hii | BACPLE_00523 | Not Available | Positive | 598562 - 599164 | 22372.0 |
| hypothetical protein | BACPLE_00524 | Not Available | Negative | 599239 - 599460 | 8381.53 |
| hydrolase, p-loop family | BACPLE_00525 | Not Available | Negative | 599463 - 599891 | 16286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

