Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system galactitol-specific iic component | BACPLE_00506 | Not Available | Negative | 579436 - 580827 | 50153.9 |
| hypothetical protein | BACPLE_00507 | Not Available | Negative | 581016 - 581204 | 7558.47 |
| hypothetical protein | BACPLE_00508 | Not Available | Negative | 581282 - 581692 | 15166.0 |
| dna topoisomerase i | BACPLE_00509 | Not Available | Positive | 581818 - 584151 | 87842.4 |
| shikimate kinase | BACPLE_00510 | Not Available | Positive | 584148 - 584672 | 19992.1 |
| arginine 2-monooxygenase | BACPLE_00511 | Not Available | Positive | 584704 - 586596 | 71532.0 |
| acetylglutamate kinase | BACPLE_00512 | Not Available | Positive | 586614 - 587387 | 27540.3 |
| rna polymerase sigma-70 factor | BACPLE_00513 | Not Available | Positive | 587453 - 587962 | 19948.8 |
| hypothetical protein | BACPLE_00514 | Not Available | Positive | 587952 - 588431 | 18678.3 |
| hypothetical protein | BACPLE_00515 | Not Available | Positive | 588621 - 588899 | 10146.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

