Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00496 | Not Available | Positive | 566275 - 566568 | 10496.3 |
| abc transporter, atp-binding protein | BACPLE_00497 | Not Available | Positive | 566702 - 567541 | 31180.0 |
| hypothetical protein | BACPLE_00498 | Not Available | Positive | 567552 - 568433 | 34214.5 |
| transcriptional regulator, gntr family | BACPLE_00499 | Not Available | Positive | 568430 - 568810 | 14788.0 |
| 3-deoxy-d-manno-octulosonic-acid transferase | BACPLE_00500 | Not Available | Negative | 568901 - 570121 | 46611.5 |
| glutamate--trna ligase | BACPLE_00501 | Not Available | Negative | 570130 - 571647 | 58048.5 |
| 7tm receptor with intracellular hd hydrolase | BACPLE_00502 | Not Available | Positive | 571733 - 573790 | 78625.6 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_00503 | Not Available | Negative | 573849 - 576716 | 110357.0 |
| transporter, major facilitator family protein | BACPLE_00504 | Not Available | Negative | 576814 - 578211 | 51346.9 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | BACPLE_00505 | Not Available | Negative | 578491 - 579411 | 34586.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

