Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m23 family | BACPLE_00466 | Not Available | Positive | 531646 - 532956 | 50283.7 |
| f5/8 type c domain protein | BACPLE_00467 | Not Available | Positive | 533396 - 537211 | 142350.0 |
| peptidase dimerization domain protein | BACPLE_00468 | Not Available | Negative | 537324 - 538388 | 38880.6 |
| amp-binding enzyme | BACPLE_00469 | Not Available | Positive | 538513 - 540327 | 68986.7 |
| peptidyl-trna hydrolase domain protein | BACPLE_00470 | Not Available | Positive | 540423 - 541538 | 42629.1 |
| hypothetical protein | BACPLE_00471 | Not Available | Positive | 541625 - 541765 | 5397.91 |
| adenylate cyclase | BACPLE_00472 | Not Available | Positive | 541781 - 542287 | 19709.4 |
| sigma-70 region 2 | BACPLE_00473 | Not Available | Positive | 542425 - 542928 | 19854.7 |
| hypothetical protein | BACPLE_00474 | Not Available | Negative | 543035 - 543430 | 15234.0 |
| sodium:neurotransmitter symporter family protein | BACPLE_00475 | Not Available | Positive | 543521 - 544894 | 49405.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

