Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BACPLE_00456 | Not Available | Negative | 520153 - 521610 | 53432.4 |
| penicillin-binding protein, transpeptidase domain protein | BACPLE_00457 | Not Available | Negative | 521617 - 523740 | 78178.1 |
| hypothetical protein | BACPLE_00458 | Not Available | Negative | 523742 - 524089 | 13374.2 |
| s-adenosyl-methyltransferase mraw | BACPLE_00459 | Not Available | Negative | 524093 - 525007 | 34998.0 |
| acyltransferase | BACPLE_00460 | Not Available | Positive | 525274 - 526092 | 31080.0 |
| hemolysin | BACPLE_00461 | Not Available | Positive | 526121 - 527110 | 37814.5 |
| putative dgtpase | BACPLE_00462 | Not Available | Negative | 527120 - 528451 | 50480.5 |
| dutp diphosphatase | BACPLE_00463 | Not Available | Positive | 528590 - 529024 | 15768.0 |
| tetratricopeptide repeat protein | BACPLE_00464 | Not Available | Positive | 529035 - 530819 | 69087.1 |
| hypothetical protein | BACPLE_00465 | Not Available | Positive | 530906 - 531649 | 27881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

