Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp:cob(i)alamin adenosyltransferase | BACPLE_00436 | Not Available | Positive | 500912 - 501481 | 21403.6 |
| hypothetical protein | BACPLE_00437 | Not Available | Positive | 501544 - 501765 | 8716.91 |
| thioredoxin | BACPLE_00438 | Not Available | Positive | 501984 - 502460 | 17284.1 |
| putative 4-alpha-glucanotransferase | BACPLE_00439 | Not Available | Negative | 502528 - 504717 | 85857.0 |
| hypothetical protein | BACPLE_00440 | Not Available | Positive | 504787 - 505233 | 16074.7 |
| dna gyrase, b subunit | BACPLE_00442 | Not Available | Negative | 505364 - 507328 | 72837.4 |
| hypothetical protein | BACPLE_00441 | Not Available | Positive | 507327 - 507446 | 4869.01 |
| ribosomal protein s20 | BACPLE_00443 | Not Available | Negative | 507492 - 507746 | 9651.98 |
| Trna-glu | Not Available | Not Available | Positive | 507790 - 507861 | Not Available |
| hypothetical protein | BACPLE_00445 | Not Available | Positive | 508239 - 508754 | 18778.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

