Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BACPLE_00405 | Not Available | Negative | 471301 - 471891 | 23095.8 |
| hypothetical protein | BACPLE_00406 | Not Available | Negative | 471916 - 472581 | 25865.4 |
| bacterial transferase hexapeptide repeat protein | BACPLE_00407 | Not Available | Negative | 472869 - 473426 | 20679.0 |
| hypothetical protein | BACPLE_00408 | Not Available | Positive | 473553 - 475019 | 56441.6 |
| hypothetical protein | BACPLE_00409 | Not Available | Negative | 475144 - 476283 | 43882.8 |
| cyclic nucleotide-binding domain protein | BACPLE_00410 | Not Available | Negative | 476359 - 476928 | 21964.6 |
| Trna-leu | Not Available | Not Available | Positive | 477096 - 477182 | Not Available |
| putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BACPLE_00412 | Not Available | Positive | 477349 - 478392 | 39918.6 |
| tonb-dependent receptor plug domain protein | BACPLE_00413 | Not Available | Negative | 478481 - 480856 | 89003.5 |
| histidine triad domain protein | BACPLE_00414 | Not Available | Negative | 480970 - 481377 | 15133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

