Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase, large subunit | BACPLE_00395 | Not Available | Positive | 454126 - 455631 | 56443.7 |
| gdsl-like protein | BACPLE_00396 | Not Available | Positive | 455674 - 456519 | 31693.8 |
| hypothetical protein | BACPLE_00397 | Not Available | Positive | 456561 - 457667 | 43689.4 |
| glycosyl hydrolase family 59 | BACPLE_00398 | Not Available | Negative | 457796 - 459928 | 80657.1 |
| hypothetical protein | BACPLE_00399 | Not Available | Negative | 460121 - 462496 | 91955.4 |
| hypothetical protein | BACPLE_00400 | Not Available | Negative | 462496 - 463866 | 52112.5 |
| hypothetical protein | BACPLE_00401 | Not Available | Negative | 463941 - 464729 | 30110.3 |
| susd family protein | BACPLE_00402 | Not Available | Negative | 465057 - 466709 | 62748.2 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00403 | Not Available | Negative | 466777 - 469992 | 120031.0 |
| sigma factor regulatory protein, fecr/pupr family | BACPLE_00404 | Not Available | Negative | 470226 - 471236 | 38741.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

