Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | BACPLE_00385 | Not Available | Negative | 441056 - 442204 | 43874.8 |
| hypothetical protein | BACPLE_00386 | Not Available | Negative | 442319 - 442645 | 12653.4 |
| efflux transporter, rnd family, mfp subunit | BACPLE_00387 | Not Available | Positive | 442936 - 444012 | 39426.7 |
| rnd transporter, hae1 family | BACPLE_00388 | Not Available | Positive | 444024 - 447056 | 112313.0 |
| outer membrane efflux protein | BACPLE_00389 | Not Available | Positive | 447053 - 448375 | 50577.7 |
| amino acid permease | BACPLE_00390 | Not Available | Positive | 448429 - 450093 | 60216.2 |
| 3'(2'),5'-bisphosphate nucleotidase | BACPLE_00391 | Not Available | Positive | 450190 - 450999 | 30010.6 |
| trka c-terminal domain protein | BACPLE_00392 | Not Available | Positive | 451011 - 452552 | 56928.1 |
| adenylyl-sulfate kinase | BACPLE_00393 | Not Available | Positive | 452578 - 453189 | 22682.5 |
| sulfate adenylyltransferase, small subunit | BACPLE_00394 | Not Available | Positive | 453202 - 454113 | 35775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

