Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00375 | Not Available | Positive | 430839 - 431207 | 13994.5 |
| biotin--[acetyl-coa-carboxylase] ligase | BACPLE_00376 | Not Available | Positive | 431227 - 431964 | 28281.4 |
| mate efflux family protein | BACPLE_00377 | Not Available | Positive | 431961 - 433277 | 48779.9 |
| ump kinase | BACPLE_00378 | Not Available | Positive | 433349 - 434059 | 25493.2 |
| phosphoglycerate mutase family protein | BACPLE_00379 | Not Available | Negative | 434125 - 434649 | 19627.6 |
| hypothetical protein | BACPLE_00380 | Not Available | Positive | 434656 - 434781 | 5130.22 |
| ribosome recycling factor | BACPLE_00381 | Not Available | Positive | 434824 - 435384 | 20740.1 |
| ribosome small subunit-dependent gtpase a | BACPLE_00382 | Not Available | Positive | 435420 - 436397 | 36531.6 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | BACPLE_00383 | Not Available | Negative | 436477 - 437928 | 54176.2 |
| putative atp synthase f0, a subunit | BACPLE_00384 | Not Available | Negative | 437909 - 441049 | 115361.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

