Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative conjugative transposon tram protein | BACPLE_03992 | Not Available | Negative | 4400442 - 4401725 | 48409.8 |
| hypothetical protein | BACPLE_03993 | Not Available | Negative | 4401712 - 4402410 | 26103.8 |
| hypothetical protein | BACPLE_03994 | Not Available | Negative | 4402415 - 4403470 | 37872.4 |
| hypothetical protein | BACPLE_03995 | Not Available | Negative | 4403477 - 4404073 | 22521.2 |
| hypothetical protein | BACPLE_03996 | Not Available | Negative | 4404079 - 4404300 | 7798.53 |
| conjugation system atpase, trag family | BACPLE_03997 | Not Available | Negative | 4404293 - 4406899 | 99450.9 |
| hypothetical protein | BACPLE_03998 | Not Available | Negative | 4406896 - 4407207 | 11796.2 |
| hypothetical protein | BACPLE_03999 | Not Available | Negative | 4407220 - 4407564 | 12471.6 |
| hypothetical protein | BACPLE_04000 | Not Available | Negative | 4407583 - 4407927 | 13247.2 |
| hypothetical protein | BACPLE_04001 | Not Available | Negative | 4407924 - 4408136 | 7739.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

