Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is4 family | BACPLE_03962 | Not Available | Negative | 4382118 - 4383281 | 45928.3 |
| hypothetical protein | BACPLE_03963 | Not Available | Positive | 4383425 - 4383562 | 5085.15 |
| hypothetical protein | BACPLE_03964 | Not Available | Positive | 4383543 - 4383704 | 6199.48 |
| hypothetical protein | BACPLE_03965 | Not Available | Positive | 4383718 - 4384167 | 17822.5 |
| hypothetical protein | BACPLE_03966 | Not Available | Positive | 4384164 - 4384646 | 18460.3 |
| hypothetical protein | BACPLE_03967 | Not Available | Negative | 4384991 - 4385188 | 7425.87 |
| hypothetical protein | BACPLE_03968 | Not Available | Negative | 4385222 - 4385341 | 4520.73 |
| single-strand binding family protein | BACPLE_03969 | Not Available | Positive | 4385520 - 4385855 | 12992.8 |
| hypothetical protein | BACPLE_03970 | Not Available | Positive | 4386025 - 4386363 | 12702.8 |
| hipa-like n-terminal domain protein | BACPLE_03971 | Not Available | Positive | 4386360 - 4387637 | 48373.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

